STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV35338.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (708 aa)    
Predicted Functional Partners:
KJV35340.1
Membrane protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.948
KJV35339.1
Na+-dependent transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
 0.821
KJV35337.1
MarR family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.808
KJV24374.1
Cytochrome B561; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.588
KJV36073.1
Aminoglycoside phosphotransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.545
KJV35811.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.537
KJV36072.1
TonB-dependent receptor; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.507
KJV35862.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.506
pheT
phenylalanyl-tRNA synthetase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
    
   0.495
KJV35336.1
Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.489
Your Current Organism:
Luteibacter yeojuensis
NCBI taxonomy Id: 345309
Other names: DSM 17673, Dyella sp. R2A16-10, Dyella yeojuensis, Dyella yeojuensis Kim et al. 2006, KACC 11405, L. yeojuensis, Luteibacter yeojuensis (Kim et al. 2006) Kampfer et al. 2009, strain R2A16-10
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