STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV33310.1Transporter; Derived by automated computational analysis using gene prediction method: Protein Homology. (521 aa)    
Predicted Functional Partners:
KJV33308.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.930
KJV33309.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.855
KJV37377.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.844
KJV33311.1
Cro/Cl family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.787
KJV33312.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.786
KJV33361.1
Alpha/beta hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
rpsJ
30S ribosomal protein S10; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family.
    
  0.761
KJV30955.1
Superoxide dismutase; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family.
    
  0.756
KJV37381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.752
KJV37382.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.752
Your Current Organism:
Luteibacter yeojuensis
NCBI taxonomy Id: 345309
Other names: DSM 17673, Dyella sp. R2A16-10, Dyella yeojuensis, Dyella yeojuensis Kim et al. 2006, KACC 11405, L. yeojuensis, Luteibacter yeojuensis (Kim et al. 2006) Kampfer et al. 2009, strain R2A16-10
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.