STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
KJV32537.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+. (142 aa)    
Predicted Functional Partners:
KJV32538.1
Cell division protein FtsK; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
lolA
Cell envelope biogenesis protein LolA; Participates in the translocation of lipoproteins from the inner membrane to the outer membrane. Only forms a complex with a lipoprotein if the residue after the N-terminal Cys is not an aspartate (The Asp acts as a targeting signal to indicate that the lipoprotein should stay in the inner membrane).
       0.675
KJV32539.1
Alanine dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.671
KJV32533.1
Recombination factor protein RarA; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
KJV32534.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
KJV32535.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.430
KJV32540.1
Thioredoxin reductase; Catalyzes the transfer of electrons from NADPH to thioredoxin; FAD/NAD(P) binding; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.429
KJV32541.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.410
aat
leucyl/phenylalanyl-tRNA--protein transferase; Functions in the N-end rule pathway of protein degradation where it conjugates Leu, Phe and, less efficiently, Met from aminoacyl- tRNAs to the N-termini of proteins containing an N-terminal arginine or lysine.
       0.410
Your Current Organism:
Luteibacter yeojuensis
NCBI taxonomy Id: 345309
Other names: DSM 17673, Dyella sp. R2A16-10, Dyella yeojuensis, Dyella yeojuensis Kim et al. 2006, KACC 11405, L. yeojuensis, Luteibacter yeojuensis (Kim et al. 2006) Kampfer et al. 2009, strain R2A16-10
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