Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EWM12144.1Hypothetical protein. (279 aa)    
Predicted Functional Partners:
EWM13665.1
RNA polymerase ECF-subfamily sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
 
   0.719
EWM17950.1
BNR/Asp-box repeat protein.
  
     0.685
EWM11876.1
Hypothetical protein.
  
     0.679
EWM13472.1
LigA protein.
  
     0.675
EWM10620.1
Secreted peptidase; Truncated CDS.
  
 
  0.663
EWM18058.1
Clumping factor.
  
     0.650
EWM12812.1
LigA protein.
  
     0.618
EWM18560.1
Transcriptional regulator.
  
     0.610
EWM16808.1
Secreted peptidase; Belongs to the peptidase S8 family.
  
 
  0.606
EWM12885.1
Hypothetical protein.
  
     0.593
Your Current Organism:
Kutzneria sp. 744
NCBI taxonomy Id: 345341
Other names: K. sp. 744
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