Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EWM12179.1FtsQ protein. (432 aa)    
Predicted Functional Partners:
EWM12177.1
FHA domain-containing protein.
       0.773
EWM12178.1
Chaperone protein ClpB.
       0.773
EWM12175.1
Organic radical activating enzyme.
       0.757
EWM12176.1
Non-ribosomal peptide synthetase.
       0.757
EWM12180.1
LigA protein.
       0.668
EWM12181.1
Non-ribosomal peptide synthetase.
       0.649
EWM12182.1
PE-PGRS family protein.
       0.649
EWM12183.1
Hypothetical protein.
       0.649
EWM12184.1
LigA protein.
       0.649
EWM12185.1
Hypothetical protein.
       0.492
Your Current Organism:
Kutzneria sp. 744
NCBI taxonomy Id: 345341
Other names: K. sp. 744
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