Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
EWM12191.1LigA protein. (556 aa)    
Predicted Functional Partners:
EWM18618.1
Amino acid adenylation protein; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.979
EWM18658.1
AMP-binding enzyme.
 
 0.976
EWM18747.1
Linear gramicidin synthetase LgrC; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.974
EWM19527.1
Non-ribosomal peptide synthetase; Unextendable partial coding region.
  
 0.968
EWM18633.1
Pyoverdine sidechain peptide synthetase III, L-Thr-L-Ser component; Belongs to the ATP-dependent AMP-binding enzyme family.
 
 0.959
EWM18656.1
Erythronolide synthase.
  
 0.956
EWM16208.1
Mycocerosic acid synthase.
  
 0.948
EWM17449.1
Erythronolide synthase.
  
 0.946
EWM17450.1
Erythronolide synthase.
  
 0.946
EWM17454.1
Erythronolide synthase.
  
 0.946
Your Current Organism:
Kutzneria sp. 744
NCBI taxonomy Id: 345341
Other names: K. sp. 744
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