Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
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Gene fusion
Co-occurrence
Co-expression
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[Homology]
Score
EWM12482.1Esterase YbdB. (147 aa)    
Predicted Functional Partners:
EWM15467.1
Naphthoate synthase; Truncated CDS.
 
  
 0.884
menA
1,4-dihydroxy-2-naphthoate octaprenyltransferase; Conversion of 1,4-dihydroxy-2-naphthoate (DHNA) to demethylmenaquinone (DMK); Belongs to the MenA family. Type 1 subfamily.
 
  
 0.801
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
       0.656
EWM12254.1
MOSC ferredoxin--Oxidoreductase.
  
 
 0.633
EWM18602.1
Linear gramicidin synthetase LgrC; Belongs to the ATP-dependent AMP-binding enzyme family.
  
 
 0.621
EWM11442.1
CDP-6-deoxy-delta-3,4-glucoseen reductase.
  
 
 0.601
EWM12448.1
Phthalate 4,5-dioxygenase.
  
 
 0.601
EWM12636.1
Phenylacetic acid degradation NADH oxidoreductase.
  
 
 0.601
EWM13720.1
Oxidoreductase, electron transfer component.
  
 
 0.601
EWM17921.1
Ketosteroid-9-alpha-hydroxylase, reductase kshB.
  
 
 0.601
Your Current Organism:
Kutzneria sp. 744
NCBI taxonomy Id: 345341
Other names: K. sp. 744
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