STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AJE02564.1NAD(P)H-quinone oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (204 aa)    
Predicted Functional Partners:
AJE03915.1
Flavodoxin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.926
ubiE
Ubiquinone biosynthesis methyltransferase UbiE; Methyltransferase required for the conversion of demethylmenaquinol (DMKH2) to menaquinol (MKH2) and the conversion of 2-polyprenyl-6-methoxy-1,4-benzoquinol (DDMQH2) to 2-polyprenyl-3- methyl-6-methoxy-1,4-benzoquinol (DMQH2).
     
  0.900
AJE03430.1
Peptidoglycan-binding protein LysM; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.599
AJE02563.1
Short-chain dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.541
AJE02199.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.537
AJE04556.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.537
AJE04685.1
Hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.491
AJE04745.1
Integrase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
  
 0.486
AJE02565.1
2-(5'-triphosphoribosyl)-3'-dephospho CoA synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.452
AJE04759.1
ATPase AAA; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.436
Your Current Organism:
Geobacter pickeringii
NCBI taxonomy Id: 345632
Other names: DSM 17153, G. pickeringii, Geobacter pickeringii Shelobolina et al. 2007, JCM 13000, strain G13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.