STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_001189965_02767Unannotated protein. (111 aa)    
Predicted Functional Partners:
GCA_001189965_02769
Unannotated protein.
 
    0.920
GCA_001189965_02766
Unannotated protein.
  
    0.918
GCA_001189965_02776
Unannotated protein.
 
    0.912
GCA_001189965_02765
Unannotated protein.
 
     0.822
GCA_001189965_02764
Unannotated protein.
 
    0.783
GCA_001189965_02768
Unannotated protein.
  
    0.778
GCA_001189965_03973
Unannotated protein.
  
 
 0.762
GCA_001189965_02770
Unannotated protein.
   
 0.720
GCA_001189965_01637
Unannotated protein.
    
 0.717
GCA_001189965_00400
Unannotated protein.
    
 0.715
Your Current Organism:
Herbaspirillum rhizosphaerae
NCBI taxonomy Id: 346179
Other names: CIP 108917, H. rhizosphaerae, Herbaspirillum rhizosphaerae Jung et al. 2007, KCTC 12558, strain UMS-37
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.