STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAY42_00515Cell division protein ZapA. (97 aa)    
Predicted Functional Partners:
AAY42_00510
Uncharacterized protein.
       0.800
AAY42_15245
Arginase; Belongs to the arginase family.
  
     0.704
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity.
  
 
 
 0.703
AAY42_07200
Lactate utilization protein B/C.
  
     0.677
AAY42_08460
Acetoin utilization protein acuB.
  
     0.628
AAY42_00505
Peptidase M23.
 
     0.619
AAY42_06070
ZIP family metal transporter.
  
     0.592
AAY42_13505
Colicin V production protein.
 
  
 0.590
AAY42_14135
Gliding motility protein GldD.
  
     0.588
AAY42_16800
TonB-dependent receptor.
  
     0.579
Your Current Organism:
Flagellimonas eckloniae
NCBI taxonomy Id: 346185
Other names: F. eckloniae, Flagellimonas eckloniae Bae et al. 2007, Flagellimonas sp. DK169, Flavobacteriaceae bacterium DOKDO 007, JCM 13831, KCCM 42307, strain DOKDO 007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.