STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAY42_03215Transketolase. (803 aa)    
Predicted Functional Partners:
AAY42_02945
Dihydrolipoyl dehydrogenase.
 
 0.999
AAY42_03455
Dehydrogenase.
 
0.999
AAY42_05750
Dihydrolipoyl dehydrogenase.
 
 0.999
AAY42_06685
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.999
AAY42_09400
Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex; E2 component of the 2-oxoglutarate dehydrogenase (OGDH) complex which catalyzes the second step in the conversion of 2- oxoglutarate to succinyl-CoA and CO(2).
 
 0.999
AAY42_15800
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
 
 0.999
AAY42_09075
Malic enzyme.
  
 
 0.987
AAY42_13645
Glutamate dehydrogenase; Belongs to the Glu/Leu/Phe/Val dehydrogenases family.
  
 
 0.977
AAY42_10635
Ribose-phosphate pyrophosphokinase.
   
 0.971
AAY42_03310
FAD-binding protein.
   
 0.920
Your Current Organism:
Flagellimonas eckloniae
NCBI taxonomy Id: 346185
Other names: F. eckloniae, Flagellimonas eckloniae Bae et al. 2007, Flagellimonas sp. DK169, Flavobacteriaceae bacterium DOKDO 007, JCM 13831, KCCM 42307, strain DOKDO 007
Server load: medium (74%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.