STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAY42_03460Lipocalin-like domain-containing protein. (161 aa)    
Predicted Functional Partners:
AAY42_03465
Membrane protein.
 
     0.912
AAY42_03480
3-oxoacyl-ACP reductase.
       0.601
AAY42_03470
FAD-dependent oxidoreductase.
       0.600
AAY42_03500
Acyl carrier protein.
 
     0.593
AAY42_03475
Methyltransf_25 domain-containing protein.
       0.586
AAY42_03490
Hydroxymyristoyl-ACP dehydratase.
       0.570
AAY42_03455
Dehydrogenase.
       0.565
AAY42_03485
Short-chain dehydrogenase.
       0.547
AAY42_14230
Uncharacterized protein.
  
     0.541
AAY42_03495
Beta-ketoacyl-ACP synthase; Belongs to the thiolase-like superfamily. Beta-ketoacyl-ACP synthases family.
       0.530
Your Current Organism:
Flagellimonas eckloniae
NCBI taxonomy Id: 346185
Other names: F. eckloniae, Flagellimonas eckloniae Bae et al. 2007, Flagellimonas sp. DK169, Flavobacteriaceae bacterium DOKDO 007, JCM 13831, KCCM 42307, strain DOKDO 007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.