Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAY42_03170 | AAY42_09485 | AAY42_03170 | AAY42_09485 | Glutamate synthase; Belongs to the glutamate synthase family. | Signal transduction protein. | 0.701 |
AAY42_03170 | AAY42_15700 | AAY42_03170 | AAY42_15700 | Glutamate synthase; Belongs to the glutamate synthase family. | Glutamate synthase. | 0.993 |
AAY42_03170 | guaA | AAY42_03170 | AAY42_05950 | Glutamate synthase; Belongs to the glutamate synthase family. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.819 |
AAY42_03170 | guaB | AAY42_03170 | AAY42_00140 | Glutamate synthase; Belongs to the glutamate synthase family. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.764 |
AAY42_03965 | AAY42_05455 | AAY42_03965 | AAY42_05455 | Serine acetyltransferase. | Aspartate kinase. | 0.785 |
AAY42_03965 | AAY42_08280 | AAY42_03965 | AAY42_08280 | Serine acetyltransferase. | Aspartate kinase. | 0.940 |
AAY42_03965 | AAY42_08285 | AAY42_03965 | AAY42_08285 | Serine acetyltransferase. | O-acetylhomoserine aminocarboxypropyltransferase. | 0.934 |
AAY42_03965 | AAY42_09485 | AAY42_03965 | AAY42_09485 | Serine acetyltransferase. | Signal transduction protein. | 0.689 |
AAY42_05455 | AAY42_03965 | AAY42_05455 | AAY42_03965 | Aspartate kinase. | Serine acetyltransferase. | 0.785 |
AAY42_05455 | AAY42_08280 | AAY42_05455 | AAY42_08280 | Aspartate kinase. | Aspartate kinase. | 0.994 |
AAY42_05455 | AAY42_08285 | AAY42_05455 | AAY42_08285 | Aspartate kinase. | O-acetylhomoserine aminocarboxypropyltransferase. | 0.823 |
AAY42_05455 | AAY42_09485 | AAY42_05455 | AAY42_09485 | Aspartate kinase. | Signal transduction protein. | 0.787 |
AAY42_05455 | AAY42_15700 | AAY42_05455 | AAY42_15700 | Aspartate kinase. | Glutamate synthase. | 0.780 |
AAY42_05455 | adk | AAY42_05455 | AAY42_15920 | Aspartate kinase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.538 |
AAY42_05455 | guaA | AAY42_05455 | AAY42_05950 | Aspartate kinase. | GMP synthase [glutamine-hydrolyzing]; Catalyzes the synthesis of GMP from XMP. | 0.806 |
AAY42_05455 | guaB | AAY42_05455 | AAY42_00140 | Aspartate kinase. | Inosine-5'-monophosphate dehydrogenase; Catalyzes the conversion of inosine 5'-phosphate (IMP) to xanthosine 5'-phosphate (XMP), the first committed and rate-limiting step in the de novo synthesis of guanine nucleotides, and therefore plays an important role in the regulation of cell growth. Belongs to the IMPDH/GMPR family. | 0.415 |
AAY42_08280 | AAY42_03965 | AAY42_08280 | AAY42_03965 | Aspartate kinase. | Serine acetyltransferase. | 0.940 |
AAY42_08280 | AAY42_05455 | AAY42_08280 | AAY42_05455 | Aspartate kinase. | Aspartate kinase. | 0.994 |
AAY42_08280 | AAY42_08285 | AAY42_08280 | AAY42_08285 | Aspartate kinase. | O-acetylhomoserine aminocarboxypropyltransferase. | 0.994 |
AAY42_08280 | AAY42_09485 | AAY42_08280 | AAY42_09485 | Aspartate kinase. | Signal transduction protein. | 0.875 |
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