STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAY42_09685Crp/Fnr family transcriptional regulator. (157 aa)    
Predicted Functional Partners:
AAY42_05260
Uncharacterized protein.
   
 0.803
AAY42_15700
Glutamate synthase.
    
 0.794
AAY42_12760
Cyclic nucleotide-binding domain-containing protein.
  
  
  0.773
AAY42_03935
Uncharacterized protein.
   
 0.643
AAY42_09645
Adenylate/guanylate cyclase.
   
 0.621
AAY42_06505
Uncharacterized protein.
 
 
 0.570
AAY42_09690
Uncharacterized protein.
       0.553
aqpZ
Aquaporin Z; Channel that permits osmotically driven movement of water in both directions. It is involved in the osmoregulation and in the maintenance of cell turgor during volume expansion in rapidly growing cells. It mediates rapid entry or exit of water in response to abrupt changes in osmolarity; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.477
AAY42_14760
MIP (Major intrinsic protein) family permease; Belongs to the MIP/aquaporin (TC 1.A.8) family.
    
  0.477
AAY42_09680
Uncharacterized protein.
       0.462
Your Current Organism:
Flagellimonas eckloniae
NCBI taxonomy Id: 346185
Other names: F. eckloniae, Flagellimonas eckloniae Bae et al. 2007, Flagellimonas sp. DK169, Flavobacteriaceae bacterium DOKDO 007, JCM 13831, KCCM 42307, strain DOKDO 007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.