Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
AAY42_01440 | AAY42_03935 | AAY42_01440 | AAY42_03935 | 8-amino-7-oxononanoate synthase. | Uncharacterized protein. | 0.787 |
AAY42_01440 | AAY42_04480 | AAY42_01440 | AAY42_04480 | 8-amino-7-oxononanoate synthase. | 8-amino-7-oxononanoate synthase. | 0.769 |
AAY42_01440 | AAY42_11005 | AAY42_01440 | AAY42_11005 | 8-amino-7-oxononanoate synthase. | NAD-dependent epimerase. | 0.483 |
AAY42_01440 | AAY42_14070 | AAY42_01440 | AAY42_14070 | 8-amino-7-oxononanoate synthase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.924 |
AAY42_01440 | bioD | AAY42_01440 | AAY42_14060 | 8-amino-7-oxononanoate synthase. | ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.721 |
AAY42_01440 | gcvP | AAY42_01440 | AAY42_15865 | 8-amino-7-oxononanoate synthase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.787 |
AAY42_01440 | kbl | AAY42_01440 | AAY42_13270 | 8-amino-7-oxononanoate synthase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.673 |
AAY42_03935 | AAY42_01440 | AAY42_03935 | AAY42_01440 | Uncharacterized protein. | 8-amino-7-oxononanoate synthase. | 0.787 |
AAY42_03935 | AAY42_04480 | AAY42_03935 | AAY42_04480 | Uncharacterized protein. | 8-amino-7-oxononanoate synthase. | 0.787 |
AAY42_03935 | gcvP | AAY42_03935 | AAY42_15865 | Uncharacterized protein. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.536 |
AAY42_03935 | kbl | AAY42_03935 | AAY42_13270 | Uncharacterized protein. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.787 |
AAY42_04480 | AAY42_01440 | AAY42_04480 | AAY42_01440 | 8-amino-7-oxononanoate synthase. | 8-amino-7-oxononanoate synthase. | 0.769 |
AAY42_04480 | AAY42_03935 | AAY42_04480 | AAY42_03935 | 8-amino-7-oxononanoate synthase. | Uncharacterized protein. | 0.787 |
AAY42_04480 | AAY42_04510 | AAY42_04480 | AAY42_04510 | 8-amino-7-oxononanoate synthase. | Threonine aldolase. | 0.850 |
AAY42_04480 | AAY42_11005 | AAY42_04480 | AAY42_11005 | 8-amino-7-oxononanoate synthase. | NAD-dependent epimerase. | 0.850 |
AAY42_04480 | AAY42_14070 | AAY42_04480 | AAY42_14070 | 8-amino-7-oxononanoate synthase. | Adenosylmethionine-8-amino-7-oxononanoate aminotransferase; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family. | 0.646 |
AAY42_04480 | bioD | AAY42_04480 | AAY42_14060 | 8-amino-7-oxononanoate synthase. | ATP-dependent dethiobiotin synthetase BioD; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring. | 0.721 |
AAY42_04480 | gcvP | AAY42_04480 | AAY42_15865 | 8-amino-7-oxononanoate synthase. | Glycine dehydrogenase (decarboxylating); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family. | 0.893 |
AAY42_04480 | glyA | AAY42_04480 | AAY42_02570 | 8-amino-7-oxononanoate synthase. | Serine hydroxymethyltransferase; Catalyzes the reversible interconversion of serine and glycine with tetrahydrofolate (THF) serving as the one-carbon carrier. This reaction serves as the major source of one-carbon groups required for the biosynthesis of purines, thymidylate, methionine, and other important biomolecules. Also exhibits THF-independent aldolase activity toward beta-hydroxyamino acids, producing glycine and aldehydes, via a retro-aldol mechanism. | 0.853 |
AAY42_04480 | kbl | AAY42_04480 | AAY42_13270 | 8-amino-7-oxononanoate synthase. | 2-amino-3-ketobutyrate coenzyme A ligase; Catalyzes the cleavage of 2-amino-3-ketobutyrate to glycine and acetyl-CoA. | 0.874 |
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