STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAY42_14735Maltose phosphorylase. (768 aa)    
Predicted Functional Partners:
AAY42_05955
Beta-phosphoglucomutase.
 
 0.994
AAY42_01690
Trehalose-6-phosphate synthase.
  
 0.833
AAY42_14740
Alpha-amylase.
  
 
  0.832
AAY42_02125
Alpha-amylase.
 
 
 0.768
AAY42_05780
Oligo-1,6-glucosidase.
 
 
 0.768
AAY42_03780
Trehalase.
   
 0.765
AAY42_05720
Glycosyl hydrolase; Belongs to the glycosyl hydrolase 31 family.
 
  
  0.752
AAY42_14730
LacI family transcriptional regulator.
 
   
 0.712
AAY42_08675
Uncharacterized protein.
    
  0.657
AAY42_17175
Alpha-glucosidase.
    
  0.657
Your Current Organism:
Flagellimonas eckloniae
NCBI taxonomy Id: 346185
Other names: F. eckloniae, Flagellimonas eckloniae Bae et al. 2007, Flagellimonas sp. DK169, Flavobacteriaceae bacterium DOKDO 007, JCM 13831, KCCM 42307, strain DOKDO 007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.