STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAY42_14895Uncharacterized protein. (509 aa)    
Predicted Functional Partners:
AAY42_01275
Uncharacterized protein.
  
     0.764
AAY42_01380
Sulfatase.
  
     0.755
AAY42_14890
DeoR faimly transcriptional regulator.
       0.586
AAY42_16655
Sulfatase.
  
  
 
0.516
AAY42_06500
Sulfatase.
  
 
   0.512
AAY42_14900
Glycosyl transferase family 2.
       0.492
AAY42_14905
Glycosyl hydrolase.
       0.492
AAY42_14910
Uncharacterized protein.
       0.492
AAY42_14915
FeS-binding protein.
       0.492
AAY42_14920
NADH dehydrogenase.
       0.492
Your Current Organism:
Flagellimonas eckloniae
NCBI taxonomy Id: 346185
Other names: F. eckloniae, Flagellimonas eckloniae Bae et al. 2007, Flagellimonas sp. DK169, Flavobacteriaceae bacterium DOKDO 007, JCM 13831, KCCM 42307, strain DOKDO 007
Server load: medium (50%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.