STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AAY42_15230FGE-sulfatase domain-containing protein. (314 aa)    
Predicted Functional Partners:
AAY42_15225
Dehydrogenase.
 
     0.935
AAY42_15235
Uncharacterized protein.
       0.517
AAY42_15255
Gliding motility protein GldL.
     
 0.480
AAY42_15780
Gliding motility protein GldJ.
  
   
 0.466
AAY42_15260
Gliding motility protein GldM.
     
 0.459
AAY42_15250
Gliding motility protein Gldk.
 
    
0.458
AAY42_15265
Gliding motility protein GldO.
     
 0.455
AAY42_07815
Arylsulfatase.
  
 
   0.440
AAY42_17135
Arylsulfatase.
  
 
   0.440
AAY42_17125
Arylsulfatase.
  
 
   0.432
Your Current Organism:
Flagellimonas eckloniae
NCBI taxonomy Id: 346185
Other names: F. eckloniae, Flagellimonas eckloniae Bae et al. 2007, Flagellimonas sp. DK169, Flavobacteriaceae bacterium DOKDO 007, JCM 13831, KCCM 42307, strain DOKDO 007
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.