Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
AAY42_02320 | AAY42_05825 | Uncharacterized protein. | Membrane protein. | 0.599 |
AAY42_02320 | AAY42_06800 | Uncharacterized protein. | Uncharacterized protein. | 0.772 |
AAY42_02320 | AAY42_09395 | Uncharacterized protein. | Acid protease. | 0.770 |
AAY42_02320 | AAY42_15450 | Uncharacterized protein. | Lipoprotein. | 0.414 |
AAY42_05825 | AAY42_02320 | Membrane protein. | Uncharacterized protein. | 0.599 |
AAY42_05825 | AAY42_06800 | Membrane protein. | Uncharacterized protein. | 0.524 |
AAY42_05825 | AAY42_09395 | Membrane protein. | Acid protease. | 0.576 |
AAY42_05825 | AAY42_15450 | Membrane protein. | Lipoprotein. | 0.450 |
AAY42_06800 | AAY42_02320 | Uncharacterized protein. | Uncharacterized protein. | 0.772 |
AAY42_06800 | AAY42_05825 | Uncharacterized protein. | Membrane protein. | 0.524 |
AAY42_06800 | AAY42_09395 | Uncharacterized protein. | Acid protease. | 0.770 |
AAY42_06800 | AAY42_15450 | Uncharacterized protein. | Lipoprotein. | 0.430 |
AAY42_09395 | AAY42_02320 | Acid protease. | Uncharacterized protein. | 0.770 |
AAY42_09395 | AAY42_05825 | Acid protease. | Membrane protein. | 0.576 |
AAY42_09395 | AAY42_06800 | Acid protease. | Uncharacterized protein. | 0.770 |
AAY42_09395 | AAY42_15450 | Acid protease. | Lipoprotein. | 0.561 |
AAY42_15450 | AAY42_02320 | Lipoprotein. | Uncharacterized protein. | 0.414 |
AAY42_15450 | AAY42_05825 | Lipoprotein. | Membrane protein. | 0.450 |
AAY42_15450 | AAY42_06800 | Lipoprotein. | Uncharacterized protein. | 0.430 |
AAY42_15450 | AAY42_09395 | Lipoprotein. | Acid protease. | 0.561 |
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