Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL22401.1 | prmA | SAMN05216500_101115 | SAMN05216500_101347 | 16S rRNA (uracil1498-N3)-methyltransferase; Specifically methylates the N3 position of the uracil ring of uridine 1498 (m3U1498) in 16S rRNA. Acts on the fully assembled 30S ribosomal subunit. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.634 |
SEL30382.1 | SEL30447.1 | SAMN05216500_101346 | SAMN05216500_101348 | MJ0042 family finger-like domain-containing protein. | Bile acid:Na+ symporter, BASS family. | 0.757 |
SEL30382.1 | SEL30487.1 | SAMN05216500_101346 | SAMN05216500_101349 | MJ0042 family finger-like domain-containing protein. | Hypothetical protein. | 0.620 |
SEL30382.1 | prmA | SAMN05216500_101346 | SAMN05216500_101347 | MJ0042 family finger-like domain-containing protein. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.832 |
SEL30447.1 | SEL30382.1 | SAMN05216500_101348 | SAMN05216500_101346 | Bile acid:Na+ symporter, BASS family. | MJ0042 family finger-like domain-containing protein. | 0.757 |
SEL30447.1 | SEL30487.1 | SAMN05216500_101348 | SAMN05216500_101349 | Bile acid:Na+ symporter, BASS family. | Hypothetical protein. | 0.656 |
SEL30447.1 | prmA | SAMN05216500_101348 | SAMN05216500_101347 | Bile acid:Na+ symporter, BASS family. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.782 |
SEL30487.1 | SEL30382.1 | SAMN05216500_101349 | SAMN05216500_101346 | Hypothetical protein. | MJ0042 family finger-like domain-containing protein. | 0.620 |
SEL30487.1 | SEL30447.1 | SAMN05216500_101349 | SAMN05216500_101348 | Hypothetical protein. | Bile acid:Na+ symporter, BASS family. | 0.656 |
SEL30487.1 | prmA | SAMN05216500_101349 | SAMN05216500_101347 | Hypothetical protein. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.646 |
adk | cmk | SAMN05216500_10559 | SAMN05216500_101432 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Cytidylate kinase. | 0.621 |
adk | gmk | SAMN05216500_10559 | SAMN05216500_10471 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.872 |
adk | ndk | SAMN05216500_10559 | SAMN05216500_109135 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.927 |
adk | prmA | SAMN05216500_10559 | SAMN05216500_101347 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.544 |
adk | pyrH | SAMN05216500_10559 | SAMN05216500_102128 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | Uridylate kinase; Catalyzes the reversible phosphorylation of UMP to UDP. | 0.685 |
adk | rplK | SAMN05216500_10559 | SAMN05216500_1045 | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | LSU ribosomal protein L11P; Forms part of the ribosomal stalk which helps the ribosome interact with GTP-bound translation factors. | 0.545 |
cmk | adk | SAMN05216500_101432 | SAMN05216500_10559 | Cytidylate kinase. | Adenylate kinase; Catalyzes the reversible transfer of the terminal phosphate group between ATP and AMP. Plays an important role in cellular energy homeostasis and in adenine nucleotide metabolism; Belongs to the adenylate kinase family. | 0.621 |
cmk | gmk | SAMN05216500_101432 | SAMN05216500_10471 | Cytidylate kinase. | Guanylate kinase; Essential for recycling GMP and indirectly, cGMP. | 0.494 |
cmk | ndk | SAMN05216500_101432 | SAMN05216500_109135 | Cytidylate kinase. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.952 |
cmk | prmA | SAMN05216500_101432 | SAMN05216500_101347 | Cytidylate kinase. | Ribosomal protein L11 methyltransferase; Methylates ribosomal protein L11; Belongs to the methyltransferase superfamily. PrmA family. | 0.575 |
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