Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL34622.1 | SEL34644.1 | SAMN05216500_101459 | SAMN05216500_101460 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Ti-type conjugative transfer relaxase TraA. | 0.504 |
SEL34622.1 | SEL34693.1 | SAMN05216500_101459 | SAMN05216500_101461 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | 0.526 |
SEL34622.1 | SEL34727.1 | SAMN05216500_101459 | SAMN05216500_101462 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.433 |
SEL34622.1 | SEL34763.1 | SAMN05216500_101459 | SAMN05216500_101463 | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | Hypothetical protein. | 0.433 |
SEL34644.1 | SEL34622.1 | SAMN05216500_101460 | SAMN05216500_101459 | Ti-type conjugative transfer relaxase TraA. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.504 |
SEL34644.1 | SEL34693.1 | SAMN05216500_101460 | SAMN05216500_101461 | Ti-type conjugative transfer relaxase TraA. | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | 0.932 |
SEL34644.1 | SEL34727.1 | SAMN05216500_101460 | SAMN05216500_101462 | Ti-type conjugative transfer relaxase TraA. | Hypothetical protein. | 0.773 |
SEL34644.1 | SEL34763.1 | SAMN05216500_101460 | SAMN05216500_101463 | Ti-type conjugative transfer relaxase TraA. | Hypothetical protein. | 0.773 |
SEL34644.1 | SEL34801.1 | SAMN05216500_101460 | SAMN05216500_101464 | Ti-type conjugative transfer relaxase TraA. | Hypothetical protein. | 0.541 |
SEL34693.1 | SEL34622.1 | SAMN05216500_101461 | SAMN05216500_101459 | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.526 |
SEL34693.1 | SEL34644.1 | SAMN05216500_101461 | SAMN05216500_101460 | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | Ti-type conjugative transfer relaxase TraA. | 0.932 |
SEL34693.1 | SEL34727.1 | SAMN05216500_101461 | SAMN05216500_101462 | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | Hypothetical protein. | 0.773 |
SEL34693.1 | SEL34763.1 | SAMN05216500_101461 | SAMN05216500_101463 | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | Hypothetical protein. | 0.773 |
SEL34693.1 | SEL34801.1 | SAMN05216500_101461 | SAMN05216500_101464 | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | Hypothetical protein. | 0.541 |
SEL34727.1 | SEL34622.1 | SAMN05216500_101462 | SAMN05216500_101459 | Hypothetical protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.433 |
SEL34727.1 | SEL34644.1 | SAMN05216500_101462 | SAMN05216500_101460 | Hypothetical protein. | Ti-type conjugative transfer relaxase TraA. | 0.773 |
SEL34727.1 | SEL34693.1 | SAMN05216500_101462 | SAMN05216500_101461 | Hypothetical protein. | Type IV secretory pathway, VirD4 component, TraG/TraD family ATPase. | 0.773 |
SEL34727.1 | SEL34763.1 | SAMN05216500_101462 | SAMN05216500_101463 | Hypothetical protein. | Hypothetical protein. | 0.773 |
SEL34727.1 | SEL34801.1 | SAMN05216500_101462 | SAMN05216500_101464 | Hypothetical protein. | Hypothetical protein. | 0.541 |
SEL34763.1 | SEL34622.1 | SAMN05216500_101463 | SAMN05216500_101459 | Hypothetical protein. | Site-specific recombinase XerD; Belongs to the 'phage' integrase family. | 0.433 |
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