Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL31756.1 | SEL40250.1 | SAMN05216500_101382 | SAMN05216500_10224 | N-acetylmuramoyl-L-alanine amidase. | Protein of unknown function. | 0.419 |
SEL40250.1 | SEL31756.1 | SAMN05216500_10224 | SAMN05216500_101382 | Protein of unknown function. | N-acetylmuramoyl-L-alanine amidase. | 0.419 |
SEL40250.1 | SEL40286.1 | SAMN05216500_10224 | SAMN05216500_10225 | Protein of unknown function. | Uncharacterized conserved protein. | 0.592 |
SEL40250.1 | SEL47677.1 | SAMN05216500_10224 | SAMN05216500_102250 | Protein of unknown function. | Iron complex transport system substrate-binding protein. | 0.420 |
SEL40250.1 | SEL97136.1 | SAMN05216500_10224 | SAMN05216500_108129 | Protein of unknown function. | Lysozyme. | 0.481 |
SEL40250.1 | SEM15894.1 | SAMN05216500_10224 | SAMN05216500_112112 | Protein of unknown function. | HopJ type III effector protein. | 0.611 |
SEL40286.1 | SEL40250.1 | SAMN05216500_10225 | SAMN05216500_10224 | Uncharacterized conserved protein. | Protein of unknown function. | 0.592 |
SEL47677.1 | SEL40250.1 | SAMN05216500_102250 | SAMN05216500_10224 | Iron complex transport system substrate-binding protein. | Protein of unknown function. | 0.420 |
SEL97136.1 | SEL40250.1 | SAMN05216500_108129 | SAMN05216500_10224 | Lysozyme. | Protein of unknown function. | 0.481 |
SEM15894.1 | SEL40250.1 | SAMN05216500_112112 | SAMN05216500_10224 | HopJ type III effector protein. | Protein of unknown function. | 0.611 |