Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEL83663.1 | SEL91147.1 | SAMN05216500_10677 | SAMN05216500_107147 | L,D-transpeptidase catalytic domain. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.442 |
| SEL83663.1 | SEL94853.1 | SAMN05216500_10677 | SAMN05216500_10849 | L,D-transpeptidase catalytic domain. | Penicillin-binding protein 1A. | 0.517 |
| SEL83663.1 | ftsI | SAMN05216500_10677 | SAMN05216500_10854 | L,D-transpeptidase catalytic domain. | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.442 |
| SEL83663.1 | mrdA | SAMN05216500_10677 | SAMN05216500_10562 | L,D-transpeptidase catalytic domain. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.936 |
| SEL83663.1 | mtgA | SAMN05216500_10677 | SAMN05216500_105172 | L,D-transpeptidase catalytic domain. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.442 |
| SEL84451.1 | SEL84484.1 | SAMN05216500_106109 | SAMN05216500_106110 | Rod shape-determining protein MreB. | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.994 |
| SEL84451.1 | ftsI | SAMN05216500_106109 | SAMN05216500_10854 | Rod shape-determining protein MreB. | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.622 |
| SEL84451.1 | ftsW | SAMN05216500_106109 | SAMN05216500_10884 | Rod shape-determining protein MreB. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.686 |
| SEL84451.1 | mrdA | SAMN05216500_106109 | SAMN05216500_10562 | Rod shape-determining protein MreB. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.881 |
| SEL84451.1 | mrdB | SAMN05216500_106109 | SAMN05216500_102162 | Rod shape-determining protein MreB. | Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.856 |
| SEL84484.1 | SEL84451.1 | SAMN05216500_106110 | SAMN05216500_106109 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape-determining protein MreB. | 0.994 |
| SEL84484.1 | SEL91147.1 | SAMN05216500_106110 | SAMN05216500_107147 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | 0.583 |
| SEL84484.1 | ftsI | SAMN05216500_106110 | SAMN05216500_10854 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division protein FtsI (penicillin-binding protein 3); Catalyzes cross-linking of the peptidoglycan cell wall at the division septum; Belongs to the transpeptidase family. FtsI subfamily. | 0.754 |
| SEL84484.1 | ftsW | SAMN05216500_106110 | SAMN05216500_10884 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Cell division-specific peptidoglycan biosynthesis regulator FtsW; Peptidoglycan polymerase that is essential for cell division. Belongs to the SEDS family. FtsW subfamily. | 0.593 |
| SEL84484.1 | mrdA | SAMN05216500_106110 | SAMN05216500_10562 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Penicillin-binding protein 2; Catalyzes cross-linking of the peptidoglycan cell wall. Belongs to the transpeptidase family. MrdA subfamily. | 0.922 |
| SEL84484.1 | mrdB | SAMN05216500_106110 | SAMN05216500_102162 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Rod shape determining protein RodA; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.822 |
| SEL84484.1 | mtgA | SAMN05216500_106110 | SAMN05216500_105172 | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family. | 0.508 |
| SEL91147.1 | SEL83663.1 | SAMN05216500_107147 | SAMN05216500_10677 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | L,D-transpeptidase catalytic domain. | 0.442 |
| SEL91147.1 | SEL84484.1 | SAMN05216500_107147 | SAMN05216500_106110 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Rod shape-determining protein MreC; Involved in formation and maintenance of cell shape. | 0.583 |
| SEL91147.1 | SEL94853.1 | SAMN05216500_107147 | SAMN05216500_10849 | Penicillin-binding protein 1B; Cell wall formation. Synthesis of cross-linked peptidoglycan from the lipid intermediates. The enzyme has a penicillin-insensitive transglycosylase N-terminal domain (formation of linear glycan strands) and a penicillin-sensitive transpeptidase C-terminal domain (cross- linking of the peptide subunits). | Penicillin-binding protein 1A. | 0.952 |
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