Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL70061.1 | SEL81831.1 | SAMN05216500_104241 | SAMN05216500_1068 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Helix-turn-helix. | 0.725 |
SEL70061.1 | SEL89180.1 | SAMN05216500_104241 | SAMN05216500_10767 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | Bifunctional NMN adenylyltransferase/nudix hydrolase. | 0.574 |
SEL70061.1 | nadE | SAMN05216500_104241 | SAMN05216500_10579 | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.596 |
SEL81831.1 | SEL70061.1 | SAMN05216500_1068 | SAMN05216500_104241 | Helix-turn-helix. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.725 |
SEL81831.1 | SEL81863.1 | SAMN05216500_1068 | SAMN05216500_1069 | Helix-turn-helix. | Hypothetical protein. | 0.555 |
SEL81831.1 | SEL89180.1 | SAMN05216500_1068 | SAMN05216500_10767 | Helix-turn-helix. | Bifunctional NMN adenylyltransferase/nudix hydrolase. | 0.705 |
SEL81831.1 | SEL90995.1 | SAMN05216500_1068 | SAMN05216500_107142 | Helix-turn-helix. | Chorismate mutase. | 0.595 |
SEL81831.1 | SEM20506.1 | SAMN05216500_1068 | SAMN05216500_1143 | Helix-turn-helix. | Transposase DDE domain-containing protein. | 0.557 |
SEL81831.1 | aroA | SAMN05216500_1068 | SAMN05216500_107141 | Helix-turn-helix. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.628 |
SEL81831.1 | aroE | SAMN05216500_1068 | SAMN05216500_112102 | Helix-turn-helix. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.552 |
SEL81831.1 | murB | SAMN05216500_1068 | SAMN05216500_11097 | Helix-turn-helix. | UDP-N-acetylmuramate dehydrogenase; Cell wall formation. | 0.573 |
SEL81831.1 | nadE | SAMN05216500_1068 | SAMN05216500_10579 | Helix-turn-helix. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.595 |
SEL81831.1 | ndk | SAMN05216500_1068 | SAMN05216500_109135 | Helix-turn-helix. | Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate; Belongs to the NDK family. | 0.555 |
SEL81863.1 | SEL81831.1 | SAMN05216500_1069 | SAMN05216500_1068 | Hypothetical protein. | Helix-turn-helix. | 0.555 |
SEL89180.1 | SEL70061.1 | SAMN05216500_10767 | SAMN05216500_104241 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | Fumarase, class I, homodimeric; Catalyzes the reversible hydration of fumarate to (S)-malate. Belongs to the class-I fumarase family. | 0.574 |
SEL89180.1 | SEL81831.1 | SAMN05216500_10767 | SAMN05216500_1068 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | Helix-turn-helix. | 0.705 |
SEL89180.1 | nadE | SAMN05216500_10767 | SAMN05216500_10579 | Bifunctional NMN adenylyltransferase/nudix hydrolase. | NAD+ synthase (glutamine-hydrolysing); Catalyzes the ATP-dependent amidation of deamido-NAD to form NAD. Uses L-glutamine as a nitrogen source. | 0.981 |
SEL90995.1 | SEL81831.1 | SAMN05216500_107142 | SAMN05216500_1068 | Chorismate mutase. | Helix-turn-helix. | 0.595 |
SEL90995.1 | aroA | SAMN05216500_107142 | SAMN05216500_107141 | Chorismate mutase. | 3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate. | 0.999 |
SEL90995.1 | aroE | SAMN05216500_107142 | SAMN05216500_112102 | Chorismate mutase. | Shikimate dehydrogenase; Involved in the biosynthesis of the chorismate, which leads to the biosynthesis of aromatic amino acids. Catalyzes the reversible NADPH linked reduction of 3-dehydroshikimate (DHSA) to yield shikimate (SA). | 0.874 |
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