Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL21001.1 | SEL57152.1 | SAMN05216500_10166 | SAMN05216500_103188 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase; Belongs to the catalase family. | 0.714 |
SEL21001.1 | SEL66066.1 | SAMN05216500_10166 | SAMN05216500_104104 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.935 |
SEL21001.1 | SEL66977.1 | SAMN05216500_10166 | SAMN05216500_104136 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Catalase. | 0.714 |
SEL21001.1 | SEL97380.1 | SAMN05216500_10166 | SAMN05216500_108137 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | Protease I. | 0.673 |
SEL21001.1 | rplN | SAMN05216500_10166 | SAMN05216500_11262 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | LSU ribosomal protein L14P; Binds to 23S rRNA. Forms part of two intersubunit bridges in the 70S ribosome; Belongs to the universal ribosomal protein uL14 family. | 0.958 |
SEL21001.1 | rpsJ | SAMN05216500_10166 | SAMN05216500_11273 | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | SSU ribosomal protein S10P; Involved in the binding of tRNA to the ribosomes. Belongs to the universal ribosomal protein uS10 family. | 0.911 |
SEL26829.1 | SEL97380.1 | SAMN05216500_101247 | SAMN05216500_108137 | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | Protease I. | 0.592 |
SEL57152.1 | SEL21001.1 | SAMN05216500_103188 | SAMN05216500_10166 | Catalase; Belongs to the catalase family. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.714 |
SEL57152.1 | SEL66066.1 | SAMN05216500_103188 | SAMN05216500_104104 | Catalase; Belongs to the catalase family. | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.777 |
SEL57152.1 | SEL91216.1 | SAMN05216500_103188 | SAMN05216500_107149 | Catalase; Belongs to the catalase family. | 8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. | 0.435 |
SEL57152.1 | SEL97380.1 | SAMN05216500_103188 | SAMN05216500_108137 | Catalase; Belongs to the catalase family. | Protease I. | 0.656 |
SEL66066.1 | SEL21001.1 | SAMN05216500_104104 | SAMN05216500_10166 | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.935 |
SEL66066.1 | SEL57152.1 | SAMN05216500_104104 | SAMN05216500_103188 | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | Catalase; Belongs to the catalase family. | 0.777 |
SEL66066.1 | SEL66977.1 | SAMN05216500_104104 | SAMN05216500_104136 | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | Catalase. | 0.777 |
SEL66066.1 | SEL97380.1 | SAMN05216500_104104 | SAMN05216500_108137 | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | Protease I. | 0.884 |
SEL66337.1 | SEL81747.1 | SAMN05216500_104113 | SAMN05216500_1066 | Hypothetical protein. | E2 family protein B. | 0.995 |
SEL66337.1 | SEL97380.1 | SAMN05216500_104113 | SAMN05216500_108137 | Hypothetical protein. | Protease I. | 0.695 |
SEL66977.1 | SEL21001.1 | SAMN05216500_104136 | SAMN05216500_10166 | Catalase. | Superoxide dismutase, Fe-Mn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the iron/manganese superoxide dismutase family. | 0.714 |
SEL66977.1 | SEL66066.1 | SAMN05216500_104136 | SAMN05216500_104104 | Catalase. | Superoxide dismutase, Cu-Zn family; Destroys radicals which are normally produced within the cells and which are toxic to biological systems. Belongs to the Cu-Zn superoxide dismutase family. | 0.777 |
SEL66977.1 | SEL91216.1 | SAMN05216500_104136 | SAMN05216500_107149 | Catalase. | 8-oxo-dGTP diphosphatase; Belongs to the Nudix hydrolase family. | 0.435 |
page 1 of 3