Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEM01435.1 | SEM01456.1 | SAMN05216500_10979 | SAMN05216500_10980 | stearoyl-CoA desaturase (delta-9 desaturase). | Hypothetical protein. | 0.536 |
SEM01435.1 | SEM01480.1 | SAMN05216500_10979 | SAMN05216500_10981 | stearoyl-CoA desaturase (delta-9 desaturase). | Predicted DNA-binding protein, MmcQ/YjbR family. | 0.442 |
SEM01456.1 | SEM01435.1 | SAMN05216500_10980 | SAMN05216500_10979 | Hypothetical protein. | stearoyl-CoA desaturase (delta-9 desaturase). | 0.536 |
SEM01456.1 | SEM01480.1 | SAMN05216500_10980 | SAMN05216500_10981 | Hypothetical protein. | Predicted DNA-binding protein, MmcQ/YjbR family. | 0.741 |
SEM01480.1 | SEM01435.1 | SAMN05216500_10981 | SAMN05216500_10979 | Predicted DNA-binding protein, MmcQ/YjbR family. | stearoyl-CoA desaturase (delta-9 desaturase). | 0.442 |
SEM01480.1 | SEM01456.1 | SAMN05216500_10981 | SAMN05216500_10980 | Predicted DNA-binding protein, MmcQ/YjbR family. | Hypothetical protein. | 0.741 |
SEM01480.1 | SEM01506.1 | SAMN05216500_10981 | SAMN05216500_10982 | Predicted DNA-binding protein, MmcQ/YjbR family. | NADPH:quinone reductase. | 0.448 |
SEM01480.1 | purL | SAMN05216500_10981 | SAMN05216500_10779 | Predicted DNA-binding protein, MmcQ/YjbR family. | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | 0.688 |
SEM01506.1 | SEM01480.1 | SAMN05216500_10982 | SAMN05216500_10981 | NADPH:quinone reductase. | Predicted DNA-binding protein, MmcQ/YjbR family. | 0.448 |
purL | SEM01480.1 | SAMN05216500_10779 | SAMN05216500_10981 | Phosphoribosylformylglycinamidine synthase; Phosphoribosylformylglycinamidine synthase involved in the purines biosynthetic pathway. Catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to yield formylglycinamidine ribonucleotide (FGAM) and glutamate. | Predicted DNA-binding protein, MmcQ/YjbR family. | 0.688 |