STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM04523.1DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (296 aa)    
Predicted Functional Partners:
SEM04470.1
Muconolactone D-isomerase.
 
   
 0.758
SEL67375.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.751
SEM04495.1
Muconate cycloisomerase; Belongs to the mandelate racemase/muconate lactonizing enzyme family.
 
   
 0.728
SEM28600.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.721
SEL52854.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.672
SEL44381.1
DNA-binding transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.659
SEM04439.1
Catechol 1,2-dioxygenase.
 
   
 0.602
SEL39355.1
Muconolactone delta-isomerase.
 
   
 0.546
SEM04550.1
Sugar phosphate permease.
  
    0.467
SEL39309.1
Catechol 1,2-dioxygenase.
 
   
 0.435
Your Current Organism:
Acinetobacter sp. DSM 11652
NCBI taxonomy Id: 346222
Other names: A. sp. DSM 11652, Acinetobacter hebeiensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.