STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM13356.1Ribonuclease T2; Belongs to the RNase T2 family. (220 aa)    
Predicted Functional Partners:
SEM13377.1
Soluble lytic murein transglycosylase.
 
   
 0.862
SEL68914.1
Hypothetical protein.
  
     0.683
SEL44090.1
Hypothetical protein.
  
     0.675
mdh
Malate dehydrogenase (NAD); Catalyzes the reversible oxidation of malate to oxaloacetate. Belongs to the LDH/MDH superfamily. MDH type 2 family.
       0.673
SEL88895.1
Hypothetical protein.
  
     0.646
SEL84746.1
Long-chain fatty acid transport protein.
  
     0.623
SEL76396.1
Long-chain fatty acid transport protein.
  
     0.617
SEL66157.1
Predicted secreted endonuclease.
  
     0.613
SEL78013.1
Hypothetical protein.
  
     0.612
miaB
tRNA-i(6)A37 thiotransferase enzyme MiaB; Catalyzes the methylthiolation of N6-(dimethylallyl)adenosine (i(6)A), leading to the formation of 2-methylthio-N6- (dimethylallyl)adenosine (ms(2)i(6)A) at position 37 in tRNAs that read codons beginning with uridine.
       0.610
Your Current Organism:
Acinetobacter sp. DSM 11652
NCBI taxonomy Id: 346222
Other names: A. sp. DSM 11652, Acinetobacter hebeiensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.