Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEL23076.1 | SEL63699.1 | SAMN05216500_101138 | SAMN05216500_10426 | acyl-CoA dehydrogenase. | Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.983 |
SEL23076.1 | SEL70146.1 | SAMN05216500_101138 | SAMN05216500_104244 | acyl-CoA dehydrogenase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.467 |
SEL23076.1 | SEM04629.1 | SAMN05216500_101138 | SAMN05216500_1108 | acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.596 |
SEL23076.1 | SEM06741.1 | SAMN05216500_101138 | SAMN05216500_11086 | acyl-CoA dehydrogenase. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.943 |
SEL23076.1 | SEM25529.1 | SAMN05216500_101138 | SAMN05216500_11634 | acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.966 |
SEL23076.1 | SEM25542.1 | SAMN05216500_101138 | SAMN05216500_11635 | acyl-CoA dehydrogenase. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.923 |
SEL23076.1 | acsA | SAMN05216500_101138 | SAMN05216500_10389 | acyl-CoA dehydrogenase. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.532 |
SEL41199.1 | SEL42305.1 | SAMN05216500_10252 | SAMN05216500_10286 | Hypothetical protein. | acyl-CoA dehydrogenase. | 0.904 |
SEL41199.1 | SEL63699.1 | SAMN05216500_10252 | SAMN05216500_10426 | Hypothetical protein. | Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.966 |
SEL41199.1 | SEL70146.1 | SAMN05216500_10252 | SAMN05216500_104244 | Hypothetical protein. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.467 |
SEL41199.1 | SEM04629.1 | SAMN05216500_10252 | SAMN05216500_1108 | Hypothetical protein. | 3-hydroxyacyl-CoA dehydrogenase. | 0.476 |
SEL41199.1 | SEM06741.1 | SAMN05216500_10252 | SAMN05216500_11086 | Hypothetical protein. | 3-ketoacyl-CoA thiolase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.923 |
SEL41199.1 | SEM24915.1 | SAMN05216500_10252 | SAMN05216500_1162 | Hypothetical protein. | acyl-CoA dehydrogenase. | 0.595 |
SEL41199.1 | SEM25529.1 | SAMN05216500_10252 | SAMN05216500_11634 | Hypothetical protein. | 3-hydroxyacyl-CoA dehydrogenase; Belongs to the enoyl-CoA hydratase/isomerase family. | 0.971 |
SEL41199.1 | SEM25542.1 | SAMN05216500_10252 | SAMN05216500_11635 | Hypothetical protein. | acetyl-CoA C-acetyltransferase; Belongs to the thiolase-like superfamily. Thiolase family. | 0.923 |
SEL41199.1 | acsA | SAMN05216500_10252 | SAMN05216500_10389 | Hypothetical protein. | Acetyl-coenzyme A synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.532 |
SEL42305.1 | SEL41199.1 | SAMN05216500_10286 | SAMN05216500_10252 | acyl-CoA dehydrogenase. | Hypothetical protein. | 0.904 |
SEL42305.1 | SEL63699.1 | SAMN05216500_10286 | SAMN05216500_10426 | acyl-CoA dehydrogenase. | Short chain enoyl-CoA hydratase; Involved in the aerobic and anaerobic degradation of long- chain fatty acids via beta-oxidation cycle. Catalyzes the formation of 3-oxoacyl-CoA from enoyl-CoA via L-3-hydroxyacyl-CoA. It can also use D-3-hydroxyacyl-CoA and cis-3-enoyl-CoA as substrate. In the C-terminal section; belongs to the 3-hydroxyacyl-CoA dehydrogenase family. | 0.966 |
SEL42305.1 | SEL70146.1 | SAMN05216500_10286 | SAMN05216500_104244 | acyl-CoA dehydrogenase. | Phosphate acetyltransferase; Involved in acetate metabolism. In the N-terminal section; belongs to the CobB/CobQ family. | 0.467 |
SEL42305.1 | SEM04629.1 | SAMN05216500_10286 | SAMN05216500_1108 | acyl-CoA dehydrogenase. | 3-hydroxyacyl-CoA dehydrogenase. | 0.562 |
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