Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| SEL33234.1 | SEL81747.1 | SAMN05216500_101419 | SAMN05216500_1066 | DNA polymerase-3 subunit delta'. | E2 family protein B. | 0.914 |
| SEL33234.1 | SEM03119.1 | SAMN05216500_101419 | SAMN05216500_109148 | DNA polymerase-3 subunit delta'. | DNA polymerase III, delta subunit. | 0.999 |
| SEL33234.1 | SEM06120.1 | SAMN05216500_101419 | SAMN05216500_11063 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit alpha. | 0.999 |
| SEL33234.1 | SEM28828.1 | SAMN05216500_101419 | SAMN05216500_11820 | DNA polymerase-3 subunit delta'. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.998 |
| SEL33234.1 | dnaX | SAMN05216500_101419 | SAMN05216500_11093 | DNA polymerase-3 subunit delta'. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
| SEL33234.1 | polA | SAMN05216500_101419 | SAMN05216500_11462 | DNA polymerase-3 subunit delta'. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.961 |
| SEL33234.1 | rnhA | SAMN05216500_101419 | SAMN05216500_10531 | DNA polymerase-3 subunit delta'. | Ribonuclease HI / DNA polymerase-3 subunit epsilon; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.942 |
| SEL73559.1 | SEM28828.1 | SAMN05216500_1057 | SAMN05216500_11820 | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. HdA subfamily. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.992 |
| SEL73559.1 | dnaA | SAMN05216500_1057 | SAMN05216500_11821 | Regulatory inactivation of DnaA Hda protein; Belongs to the DnaA family. HdA subfamily. | Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box): 5'- TTATC[CA]A[CA]A-3'. DnaA binds to ATP and to acidic phospholipids. Belongs to the DnaA family. | 0.784 |
| SEL81747.1 | SEL33234.1 | SAMN05216500_1066 | SAMN05216500_101419 | E2 family protein B. | DNA polymerase-3 subunit delta'. | 0.914 |
| SEL81747.1 | SEM28828.1 | SAMN05216500_1066 | SAMN05216500_11820 | E2 family protein B. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.986 |
| SEL81747.1 | polA | SAMN05216500_1066 | SAMN05216500_11462 | E2 family protein B. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.734 |
| SEM03119.1 | SEL33234.1 | SAMN05216500_109148 | SAMN05216500_101419 | DNA polymerase III, delta subunit. | DNA polymerase-3 subunit delta'. | 0.999 |
| SEM03119.1 | SEM06120.1 | SAMN05216500_109148 | SAMN05216500_11063 | DNA polymerase III, delta subunit. | DNA polymerase-3 subunit alpha. | 0.998 |
| SEM03119.1 | SEM28828.1 | SAMN05216500_109148 | SAMN05216500_11820 | DNA polymerase III, delta subunit. | DNA polymerase III, beta subunit; Confers DNA tethering and processivity to DNA polymerases and other proteins. Acts as a clamp, forming a ring around DNA (a reaction catalyzed by the clamp-loading complex) which diffuses in an ATP- independent manner freely and bidirectionally along dsDNA. Initially characterized for its ability to contact the catalytic subunit of DNA polymerase III (Pol III), a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria; Pol III exhibits 3'-5' exonuclease proofreading activity. The beta chain is required for initiation of [...] | 0.999 |
| SEM03119.1 | dnaX | SAMN05216500_109148 | SAMN05216500_11093 | DNA polymerase III, delta subunit. | DNA polymerase-3 subunit gamma/tau; DNA polymerase III is a complex, multichain enzyme responsible for most of the replicative synthesis in bacteria. This DNA polymerase also exhibits 3' to 5' exonuclease activity. | 0.999 |
| SEM03119.1 | polA | SAMN05216500_109148 | SAMN05216500_11462 | DNA polymerase III, delta subunit. | DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family. | 0.520 |
| SEM03119.1 | rnhA | SAMN05216500_109148 | SAMN05216500_10531 | DNA polymerase III, delta subunit. | Ribonuclease HI / DNA polymerase-3 subunit epsilon; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids. | 0.965 |
| SEM06120.1 | SEL33234.1 | SAMN05216500_11063 | SAMN05216500_101419 | DNA polymerase-3 subunit alpha. | DNA polymerase-3 subunit delta'. | 0.999 |
| SEM06120.1 | SEM03119.1 | SAMN05216500_11063 | SAMN05216500_109148 | DNA polymerase-3 subunit alpha. | DNA polymerase III, delta subunit. | 0.998 |
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