STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEM30570.1Type IV secretion system protein VirB4. (833 aa)    
Predicted Functional Partners:
SEM30404.1
Type IV secretion system protein VirB9.
 
 
 0.986
SEM30330.1
Type IV secretion system protein VirB10.
 
 
 0.986
SEM30633.1
Type IV secretion system protein VirB2.
 
 
 0.980
SEM30545.1
P-type conjugative transfer protein TrbJ.
 
  
 0.974
SEM30663.1
Type IV secretion system protein VirB11.
 
  
 0.970
SEM30603.1
Type IV secretion system protein VirB3.
 
  
 0.969
SEM30510.1
Type IV secretion system protein TrbL.
 
  
 0.956
SEM30454.1
Type IV secretion system protein VirB5.
 
 
 0.939
SEM30857.1
Type IV secretion system protein VirD4.
 
  
 0.847
SEM30943.1
Conjugative transfer signal peptidase TraF.
 
   
 0.818
Your Current Organism:
Acinetobacter sp. DSM 11652
NCBI taxonomy Id: 346222
Other names: A. sp. DSM 11652, Acinetobacter hebeiensis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.