STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_036684PORR domain-containing protein. (421 aa)    
Predicted Functional Partners:
C5167_007084
C2H2-type domain-containing protein.
      
 0.535
C5167_021975
C2H2-type domain-containing protein.
      
 0.535
C5167_039203
Uncharacterized protein.
      
 0.520
C5167_009233
Uncharacterized protein.
      
 0.520
C5167_047638
PORR domain-containing protein.
      
0.520
C5167_015165
Uncharacterized protein.
      
 0.508
C5167_038655
Uncharacterized protein.
      
 0.459
C5167_025823
Uncharacterized protein.
      
 0.459
C5167_011053
Uncharacterized protein.
      
 0.459
C5167_032589
Endo/exonuclease/phosphatase domain-containing protein.
      
 0.438
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.