STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_037647Rep_fac-A_C domain-containing protein. (383 aa)    
Predicted Functional Partners:
C5167_047075
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
 0.744
C5167_039678
RPA_C domain-containing protein.
   
 0.711
C5167_015279
RPA_C domain-containing protein.
   
 0.711
C5167_034329
RPA_C domain-containing protein.
   
 0.711
C5167_032408
Uncharacterized protein.
    
 0.677
C5167_049629
Uncharacterized protein.
    
 0.677
C5167_041044
ERCC4 domain-containing protein.
    
 0.672
C5167_032352
PPIase cyclophilin-type domain-containing protein.
    
 0.672
C5167_050785
DUF1767 domain-containing protein.
    
 0.647
C5167_013050
Uncharacterized protein.
    
 0.615
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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