STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_038369Tify domain-containing protein. (152 aa)    
Predicted Functional Partners:
C5167_015360
BHLH domain-containing protein.
   
 
 0.794
C5167_032456
BHLH domain-containing protein.
   
 
 0.596
C5167_049600
BHLH domain-containing protein.
   
 
 0.596
C5167_040929
Tify domain-containing protein.
   
 
 0.560
C5167_006750
Tify domain-containing protein.
   
 
0.560
C5167_022272
Tify domain-containing protein.
   
 
0.560
C5167_036986
WRKY domain-containing protein.
      
 0.535
C5167_008482
WRKY domain-containing protein.
      
 0.535
C5167_018669
Jas domain-containing protein.
    
 
 0.498
C5167_019728
Jas domain-containing protein.
    
 
 0.498
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.