C5167_038253 protein (Papaver somniferum) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

C5167_038253

Uncharacterized protein; Belongs to the cytochrome P450 family. (89 aa)

Predicted Functional Partners:

C5167_006580

0.581

C5167_022380

0.581

C5167_003887

0.518

C5167_022930

0.468

C5167_017718

0.402

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_003887	C5167_017718	A0A4Y7KXA9	A0A4Y7IMF7	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.621
C5167_003887	C5167_022930	A0A4Y7KXA9	A0A4Y7JND3	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein.	0.646
C5167_003887	C5167_038253	A0A4Y7KXA9	A0A4Y7IB87	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.518
C5167_006580	C5167_017718	A0A4Y7JDP1	A0A4Y7IMF7	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.491
C5167_006580	C5167_022930	A0A4Y7JDP1	A0A4Y7JND3	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein.	0.529
C5167_006580	C5167_038253	A0A4Y7JDP1	A0A4Y7IB87	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.581
C5167_017718	C5167_003887	A0A4Y7IMF7	A0A4Y7KXA9	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.621
C5167_017718	C5167_006580	A0A4Y7IMF7	A0A4Y7JDP1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.491
C5167_017718	C5167_022380	A0A4Y7IMF7	A0A4Y7JKU1	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.491
C5167_017718	C5167_022930	A0A4Y7IMF7	A0A4Y7JND3	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein.	0.489
C5167_017718	C5167_038253	A0A4Y7IMF7	A0A4Y7IB87	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.402
C5167_022380	C5167_017718	A0A4Y7JKU1	A0A4Y7IMF7	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.491
C5167_022380	C5167_022930	A0A4Y7JKU1	A0A4Y7JND3	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein.	0.529
C5167_022380	C5167_038253	A0A4Y7JKU1	A0A4Y7IB87	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.581
C5167_022930	C5167_003887	A0A4Y7JND3	A0A4Y7KXA9	Uncharacterized protein.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.646
C5167_022930	C5167_006580	A0A4Y7JND3	A0A4Y7JDP1	Uncharacterized protein.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.529
C5167_022930	C5167_017718	A0A4Y7JND3	A0A4Y7IMF7	Uncharacterized protein.	Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.	0.489
C5167_022930	C5167_022380	A0A4Y7JND3	A0A4Y7JKU1	Uncharacterized protein.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.529
C5167_022930	C5167_038253	A0A4Y7JND3	A0A4Y7IB87	Uncharacterized protein.	Uncharacterized protein; Belongs to the cytochrome P450 family.	0.468
C5167_038253	C5167_003887	A0A4Y7IB87	A0A4Y7KXA9	Uncharacterized protein; Belongs to the cytochrome P450 family.	Lipoxygenase; Plant lipoxygenase may be involved in a number of diverse aspects of plant physiology including growth and development, pest resistance, and senescence or responses to wounding.	0.518