STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_038197ATP-dependent DNA helicase; Belongs to the helicase family. (202 aa)    
Predicted Functional Partners:
C5167_047075
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
  
 
 0.884
C5167_032408
Uncharacterized protein.
    
 
 0.691
C5167_049629
Uncharacterized protein.
    
 
 0.691
C5167_025092
Ku domain-containing protein.
    
 
 0.655
C5167_001626
Uncharacterized protein.
    
 0.646
C5167_031923
Uncharacterized protein.
   
 
 0.637
C5167_050019
DNA polymerase alpha subunit B; Accessory subunit of the DNA polymerase alpha complex (also known as the alpha DNA polymerase-primase complex) which plays an essential role in the initiation of DNA synthesis.
   
 
 0.628
C5167_001665
Uncharacterized protein.
   
 
 0.622
C5167_045855
Uncharacterized protein.
   
 
 0.622
C5167_000424
AAA_16 domain-containing protein.
    
 
 0.614
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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