STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_039923Uncharacterized protein. (57 aa)    
Predicted Functional Partners:
C5167_004975
Uncharacterized protein.
  
 
 0.953
C5167_019012
Uncharacterized protein; Belongs to the aspartate/ornithine carbamoyltransferase superfamily.
   
 0.880
C5167_039450
Amidohydro-rel domain-containing protein.
  
 0.851
C5167_009134
Amidohydro-rel domain-containing protein.
  
 0.851
C5167_001886
Amidohydro-rel domain-containing protein.
  
 0.851
C5167_045555
Amidohydro-rel domain-containing protein.
  
 0.851
C5167_013093
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
  
 
 0.849
C5167_003840
OMPdecase domain-containing protein.
  
 
 0.823
C5167_045802
OMPdecase domain-containing protein.
  
 
 0.823
C5167_039488
Amidohydro-rel domain-containing protein.
   
 
 0.780
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (16%) [HD]