STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_040393Uncharacterized protein. (449 aa)    
Predicted Functional Partners:
C5167_048339
Uncharacterized protein; Belongs to the membrane-bound acyltransferase family.
     
 0.935
C5167_015168
Phosphatidylserine decarboxylase proenzyme 1, mitochondrial; Catalyzes the formation of phosphatidylethanolamine (PtdEtn) from phosphatidylserine (PtdSer). Plays a central role in phospholipid metabolism and in the interorganelle trafficking of phosphatidylserine. Belongs to the phosphatidylserine decarboxylase family. PSD-B subfamily. Eukaryotic type I sub-subfamily.
     
 0.927
C5167_023910
PNPLA domain-containing protein.
     
 0.917
C5167_009752
Uncharacterized protein.
     
 0.917
C5167_031867
PNPLA domain-containing protein.
     
 0.917
C5167_048599
Uncharacterized protein.
     
 0.912
C5167_038478
PlsC domain-containing protein.
     
 0.908
C5167_003489
Uncharacterized protein.
     
 0.908
C5167_011438
Uncharacterized protein.
  
  
 
0.902
C5167_006663
Uncharacterized protein.
     
 0.901
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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