STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_040043Ribosomal_L16 domain-containing protein; Belongs to the universal ribosomal protein uL16 family. (124 aa)    
Predicted Functional Partners:
C5167_018541
Uncharacterized protein.
   
 
 0.978
C5167_019143
KOW domain-containing protein; Belongs to the universal ribosomal protein uL24 family.
  
 0.971
C5167_013667
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
  
 
 0.969
C5167_019546
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.965
C5167_018862
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.965
C5167_000610
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 0.963
C5167_046522
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit.
   
 0.963
C5167_004443
Uncharacterized protein.
 
 0.962
C5167_047947
Uncharacterized protein.
 
 0.961
C5167_038261
Uncharacterized protein; Belongs to the universal ribosomal protein uS19 family.
  
 
 0.956
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.