STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_040826Uncharacterized protein; Belongs to the SKP1 family. (306 aa)    
Predicted Functional Partners:
C5167_031312
Uncharacterized protein.
   
 0.862
C5167_001238
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.647
C5167_001407
Cyclin-dependent kinases regulatory subunit; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function.
    
 0.647
C5167_047491
WD_REPEATS_REGION domain-containing protein.
    
 
 0.635
C5167_006491
Ubiquitin-like domain-containing protein.
   
 0.627
C5167_015262
MPN domain-containing protein.
   
 0.599
C5167_034327
MPN domain-containing protein.
   
 0.599
C5167_014249
E2_bind domain-containing protein.
     
 0.564
C5167_005461
Skp1_POZ domain-containing protein; Belongs to the SKP1 family.
   
 
 0.540
C5167_023108
Phos_pyr_kin domain-containing protein.
    
 
 0.500
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.