STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_040701Uncharacterized protein. (583 aa)    
Predicted Functional Partners:
C5167_013667
S5 DRBM domain-containing protein; Belongs to the universal ribosomal protein uS5 family.
   
   0.816
C5167_002396
Uncharacterized protein.
   
   0.809
C5167_017452
Ribosomal_L18e/L15P domain-containing protein.
   
   0.808
C5167_001641
Uncharacterized protein.
   
   0.807
C5167_037913
Uncharacterized protein.
    
   0.800
C5167_010296
Uncharacterized protein.
    
   0.800
C5167_040489
RIBOSOMAL_L9 domain-containing protein.
    
   0.800
C5167_018541
Uncharacterized protein.
    
   0.800
C5167_019900
Ribosomal_S10 domain-containing protein.
    
   0.800
C5167_012963
Uncharacterized protein; Belongs to the universal ribosomal protein uL14 family.
    
   0.800
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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