STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_019844Uncharacterized protein. (805 aa)    
Predicted Functional Partners:
C5167_020412
Aldedh domain-containing protein.
   
 0.945
C5167_014672
Uncharacterized protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
     
 0.920
C5167_018582
Uncharacterized protein.
  
  
 
0.903
C5167_048540
Uncharacterized protein.
  
  
 
0.902
C5167_043321
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex.
     
 0.835
C5167_049906
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.828
C5167_003673
Uncharacterized protein.
   
 0.809
C5167_047253
Uncharacterized protein.
   
 0.809
C5167_039538
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.808
C5167_008966
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 0.808
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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