STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_019452DUF2431 domain-containing protein. (274 aa)    
Predicted Functional Partners:
C5167_022995
Brix domain-containing protein.
   
    0.475
C5167_012658
Brix domain-containing protein.
   
    0.473
C5167_023770
Brix domain-containing protein.
   
    0.473
C5167_006333
Uncharacterized protein.
   
    0.472
C5167_048340
Uncharacterized protein.
   
    0.472
C5167_024255
Uncharacterized protein.
   
    0.441
C5167_032112
Uncharacterized protein.
   
    0.441
C5167_012408
Uncharacterized protein.
   
  
 0.435
C5167_008215
Uncharacterized protein.
   
  
 0.426
C5167_005750
S4 RNA-binding domain-containing protein.
   
    0.404
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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