STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_0197883'-5' exonuclease domain-containing protein. (327 aa)    
Predicted Functional Partners:
C5167_038801
Uncharacterized protein.
   
 0.559
C5167_011185
Uncharacterized protein.
   
 0.559
C5167_025092
Ku domain-containing protein.
    
 
 0.548
C5167_002470
RECA_2 domain-containing protein.
    
 0.539
C5167_032408
Uncharacterized protein.
   
 
 0.526
C5167_049629
Uncharacterized protein.
   
 
 0.526
C5167_050785
DUF1767 domain-containing protein.
     
 0.485
C5167_014088
Uncharacterized protein.
     
 0.479
C5167_047075
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand; Belongs to the PCNA family.
   
  0.433
C5167_004742
AAA domain-containing protein.
   
 
 0.430
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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