STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_020959ULP_PROTEASE domain-containing protein. (440 aa)    
Predicted Functional Partners:
C5167_022687
Ipi1_N domain-containing protein.
    
 0.723
C5167_003250
Uncharacterized protein.
   
 0.587
C5167_046221
Uncharacterized protein.
   
 0.587
C5167_019074
Small ubiquitin-related modifier.
    
 0.567
C5167_004532
Rad60-SLD domain-containing protein.
    
 0.567
C5167_015366
Uncharacterized protein.
    
 0.567
C5167_004535
Rad60-SLD domain-containing protein.
    
 0.567
C5167_005238
Ubiquitin-like domain-containing protein.
    
 0.567
C5167_024160
Rad60-SLD domain-containing protein.
    
 0.567
C5167_023527
Ubiquitin-like domain-containing protein.
    
 0.567
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.