STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_013242Importin N-terminal domain-containing protein. (1086 aa)    
Predicted Functional Partners:
C5167_031613
Uncharacterized protein.
   
 
 0.602
C5167_050819
Uncharacterized protein.
   
 
 0.602
C5167_004334
Uncharacterized protein.
   
    0.592
C5167_048069
Uncharacterized protein.
   
    0.592
C5167_036993
Uncharacterized protein.
   
  
 0.561
C5167_021748
RNA cytidine acetyltransferase; RNA cytidine acetyltransferase with specificity toward both 18S rRNA and tRNAs. Catalyzes the formation of N(4)-acetylcytidine (ac4C) in 18S rRNA. Required for early nucleolar cleavages of precursor rRNA at sites A0, A1 and A2 during 18S rRNA synthesis. Catalyzes the formation of ac4C in serine and leucine tRNAs. Requires a tRNA-binding adapter protein for full tRNA acetyltransferase activity but not for 18S rRNA acetylation.
   
  
 0.561
C5167_038706
CBF domain-containing protein.
   
 
 0.536
C5167_001665
Uncharacterized protein.
   
 
 0.485
C5167_045855
Uncharacterized protein.
   
 
 0.485
C5167_040237
Importin N-terminal domain-containing protein.
   
 
 0.475
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
Server load: low (22%) [HD]