STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_014075Uncharacterized protein. (92 aa)    
Predicted Functional Partners:
C5167_040992
Peptidylprolyl isomerase.
   
 0.643
C5167_014045
Uncharacterized protein.
   
  
 0.558
C5167_040144
Peptidylprolyl isomerase.
   
  
 0.508
C5167_041152
Peptidylprolyl isomerase.
   
  
 0.508
C5167_002330
Protein phosphatase; Belongs to the PP2C family.
   
  
 0.487
C5167_015429
Uncharacterized protein.
   
  
 0.467
C5167_034071
Uncharacterized protein.
   
  
 0.467
C5167_018939
Peptidylprolyl isomerase.
   
  
 0.465
C5167_036488
PsbP domain-containing protein.
   
  
 0.463
C5167_009199
Cytochrome b6-f complex iron-sulfur subunit; Component of the cytochrome b6-f complex, which mediates electron transfer between photosystem II (PSII) and photosystem I (PSI), cyclic electron flow around PSI, and state transitions.
  
  
 0.436
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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