C5167_005115 protein (Papaver somniferum) - STRING interaction network

Nodes:

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second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

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Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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Databases

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[Homology]

Score

C5167_005115

Uncharacterized protein. (133 aa)

Predicted Functional Partners:

C5167_015098

0.997

C5167_006491

0.996

C5167_004736

0.992

C5167_011268

0.992

C5167_040631

0.990

C5167_033419

0.990

C5167_050177

0.990

C5167_019263

0.990

C5167_007183

0.989

C5167_031684

0.989

Your Current Organism:

Papaver somniferum

NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
C5167_004736	C5167_005115	A0A4Y7IAG9	A0A4Y7J9K1	TRASH domain-containing protein.	Uncharacterized protein.	0.992
C5167_004736	C5167_006491	A0A4Y7IAG9	A0A4Y7JHF4	TRASH domain-containing protein.	Ubiquitin-like domain-containing protein.	0.997
C5167_004736	C5167_007183	A0A4Y7IAG9	A0A4Y7JJT7	TRASH domain-containing protein.	Uncharacterized protein.	0.998
C5167_004736	C5167_015098	A0A4Y7IAG9	A0A4Y7J520	TRASH domain-containing protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.998
C5167_004736	C5167_019263	A0A4Y7IAG9	A0A4Y7L8M2	TRASH domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.998
C5167_004736	C5167_031684	A0A4Y7IAG9	A0A4Y7K7Z1	TRASH domain-containing protein.	Uncharacterized protein.	0.998
C5167_004736	C5167_033419	A0A4Y7IAG9	A0A4Y7KAA4	TRASH domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.998
C5167_004736	C5167_040631	A0A4Y7IAG9	A0A4Y7IJ18	TRASH domain-containing protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.998
C5167_004736	C5167_050177	A0A4Y7IAG9	A0A4Y7KPB2	TRASH domain-containing protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.998
C5167_005115	C5167_004736	A0A4Y7J9K1	A0A4Y7IAG9	Uncharacterized protein.	TRASH domain-containing protein.	0.992
C5167_005115	C5167_006491	A0A4Y7J9K1	A0A4Y7JHF4	Uncharacterized protein.	Ubiquitin-like domain-containing protein.	0.996
C5167_005115	C5167_007183	A0A4Y7J9K1	A0A4Y7JJT7	Uncharacterized protein.	Uncharacterized protein.	0.989
C5167_005115	C5167_011268	A0A4Y7J9K1	A0A4Y7K419	Uncharacterized protein.	Uncharacterized protein.	0.992
C5167_005115	C5167_015098	A0A4Y7J9K1	A0A4Y7J520	Uncharacterized protein.	60S ribosomal protein L29; Belongs to the eukaryotic ribosomal protein eL29 family.	0.997
C5167_005115	C5167_019263	A0A4Y7J9K1	A0A4Y7L8M2	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.990
C5167_005115	C5167_031684	A0A4Y7J9K1	A0A4Y7K7Z1	Uncharacterized protein.	Uncharacterized protein.	0.989
C5167_005115	C5167_033419	A0A4Y7J9K1	A0A4Y7KAA4	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.990
C5167_005115	C5167_040631	A0A4Y7J9K1	A0A4Y7IJ18	Uncharacterized protein.	Uncharacterized protein; Belongs to the eukaryotic ribosomal protein eL38 family.	0.990
C5167_005115	C5167_050177	A0A4Y7J9K1	A0A4Y7KPB2	Uncharacterized protein.	Uncharacterized protein; Belongs to the universal ribosomal protein uL22 family.	0.990
C5167_006491	C5167_004736	A0A4Y7JHF4	A0A4Y7IAG9	Ubiquitin-like domain-containing protein.	TRASH domain-containing protein.	0.997

page 1 of 6

Network Stats

number of nodes:

11

number of edges:

19

average node degree:

3.45

avg. local clustering coefficient:

0.655

expected number of edges:

11

PPI enrichment p-value:

0.0133

your network has significantly more interactions
than expected (what does that mean?)

Functional enrichments in your networkNote: some enrichments may be expected here (why?)
disable highlight explain columns

Biological Process (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0006486

Protein glycosylation

7 of 658

2.01

3.96

6.33e-10

GO:0009938

Negative regulation of gibberellic acid mediated signaling pathway

3 of 18

3.2

3.44

5.64e-07

GO:0006493

Protein O-linked glycosylation

3 of 43

2.82

2.87

5.36e-06

GO:0009910

Negative regulation of flower development

3 of 62

2.66

2.65

1.23e-05

GO:2000377

Regulation of reactive oxygen species metabolic process

3 of 91

2.5

2.37

3.54e-05

(more ...)

Molecular Function (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0097363

Protein O-GlcNAc transferase activity

7 of 7

3.98

12.16

1.10e-22

GO:0015204

Urea transmembrane transporter activity

3 of 4

3.86

4.11

4.09e-08

GO:0015293

Symporter activity

3 of 419

1.83

1.13

0.0057

Cellular Component (Gene Ontology)

GO-term

description

count in network

strength

signal

false discovery rate

GO:0110165

Cellular anatomical entity

11 of 19699

0.73

0.69

9.29e-06

Local Network Cluster (STRING)

cluster

description

count in network

strength

signal

false discovery rate

CL:43080

Glycosyl transferase family 41, and Unfolded Protein Response (UPR)

6 of 9

3.8

9.51

6.35e-18

CL:43038

Mixed, incl. Ribosomal protein L25/L23, and Protein O-GlcNAc transferase activity

7 of 33

3.31

9.48

3.37e-18

CL:101795

Mixed, incl. Sodium/solute symporter, and Plasma-membrane choline transporter

4 of 11

3.54

5.4

1.71e-10

CL:101797

Mixed, incl. Sodium/solute symporter, and Allantoate deiminase activity

3 of 6

3.68

3.95

7.88e-08

KEGG Pathways

pathway

description

count in network

strength

signal

false discovery rate

map00514

Other types of O-glycan biosynthesis

7 of 134

2.7

7.83

3.48e-16

Reactome Pathways

pathway

description

count in network

strength

signal

false discovery rate

MAP-5675482

Regulation of necroptotic cell death

7 of 10

3.83

11.98

2.01e-22

MAP-5213460

RIPK1-mediated regulated necrosis

7 of 10

3.83

11.98

2.01e-22

MAP-5218859

Regulated Necrosis

7 of 19

3.55

11.31

2.26e-21

MAP-5357801

Programmed Cell Death

7 of 172

2.59

7.24

2.66e-15

MAP-5689603

UCH proteinases

7 of 408

2.21

5.43

8.14e-13

(more ...)

Subcellular Localization (COMPARTMENTS)

compartment

description

count in network

strength

signal

false discovery rate

GOCC:0017122

Protein N-acetylglucosaminyltransferase complex

7 of 13

3.71

11.47

1.52e-21

GOCC:0110165

Cellular anatomical entity

7 of 8339

0.9

0.72

0.0020

Annotated Keywords (UniProt)

keyword

description

count in network

strength

signal

false discovery rate

KW-0802

TPR repeat

6 of 350

2.21

4.51

2.35e-10

KW-0677

Repeat

6 of 2899

1.3

1.44

3.24e-05

Protein Domains (Pfam)

domain

description

count in network

strength

signal

false discovery rate

PF13844

Glycosyl transferase family 41

6 of 6

3.98

10.05

7.47e-19

PF00474

Sodium:solute symporter family

3 of 3

3.98

4.21

2.79e-08

Protein Domains and Features (InterPro)

domain

description

count in network

strength

signal

false discovery rate

IPR029489

O-GlcNAc transferase, C-terminal

6 of 6

3.98

9.8

2.16e-18

IPR006597

Sel1-like repeat

6 of 20

3.46

8.54

2.68e-16

IPR001440

Tetratricopeptide repeat 1

6 of 76

2.88

6.65

2.71e-13

IPR038377

Sodium/glucose symporter superfamily

3 of 3

3.98

4.17

3.22e-08

IPR037919

UDP-N-acetylglucosamine--peptide N-acetylglucosaminyltransferase 110kDa subunit

3 of 3

3.98

4.17

3.22e-08

(more ...)

Protein Domains (SMART)

domain

description

count in network

strength

signal

false discovery rate

SM00671

Sel1-like repeats.

6 of 20

3.46

9.0

3.74e-17

SM00028

Tetratricopeptide repeats

6 of 264

2.34

5.01

4.09e-11

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