STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_005476Auxin efflux carrier component; May act as a component of the auxin efflux carrier. Belongs to the auxin efflux carrier (TC 2.A.69.1) family. (682 aa)    
Predicted Functional Partners:
C5167_042436
Uncharacterized protein.
      
 0.503
C5167_014338
F-box domain-containing protein.
  
   
 0.472
C5167_020307
F-box domain-containing protein.
  
   
 0.469
C5167_036313
F-box_5 domain-containing protein.
  
   
 0.467
C5167_013131
Aa_trans domain-containing protein.
   
  
 0.467
C5167_024330
Aa_trans domain-containing protein.
   
  
 0.467
C5167_046190
Uncharacterized protein.
      
 0.465
C5167_019196
Uncharacterized protein.
  
   
 0.459
C5167_043106
Uncharacterized protein.
  
   
 0.454
C5167_051084
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.444
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.