STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5167_022106Mg-por_mtran_C domain-containing protein. (330 aa)    
Predicted Functional Partners:
C5167_032162
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
 
 
 0.989
C5167_049780
Mg-protoporphyrin IX chelatase; Involved in chlorophyll biosynthesis. Catalyzes the insertion of magnesium ion into protoporphyrin IX to yield Mg-protoporphyrin IX. Belongs to the Mg-chelatase subunits D/I family.
 
 
 0.989
C5167_001841
VWFA domain-containing protein.
  
 
 0.977
C5167_045511
VWFA domain-containing protein.
  
 
 0.977
C5167_046069
S-acyltransferase; Belongs to the DHHC palmitoyltransferase family.
  
 
 0.972
C5167_003551
Rubrerythrin domain-containing protein.
  
 
 0.970
C5167_006912
Mg-por_mtran_C domain-containing protein.
  
  
 
0.900
C5167_015002
ABC1 domain-containing protein.
   
 0.897
C5167_042769
Pyr_redox_2 domain-containing protein.
 
  
 0.830
C5167_038929
RING-type domain-containing protein.
   
 0.827
Your Current Organism:
Papaver somniferum
NCBI taxonomy Id: 3469
Other names: P. somniferum, Papaver somniferum L., Papaver somniferum convar. nigrum (Hayne) Alef., opium poppy
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